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This is a thesis template made for the students at the University of Agder, Norway. The table of content is given as an example, discuss the content with your group and supervisor.
Template for American Physical Society (APS) and American Institute of Physics (AIP) journals, including Physical Review Letters, Physical Review A-E, Physical Review X, Reviews of Modern Physics, Applied Phyiscs Letters, using the ReVTeX 4.2 document class.
Template for writing Master's/PhD thesis reports at the University of Rochester. I believe it's a simple enough template that can be used with most other universities as well.